Protein–RNA interactions for Protein: Q3TQS0

Calr4, Calreticulin 4, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calr4Q3TQS0 Gm12134-201ENSMUST00000122109 520 ntBASIC20.31■□□□□ 0.84
Calr4Q3TQS0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Calr4Q3TQS0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC20.31■□□□□ 0.84
Calr4Q3TQS0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Calr4Q3TQS0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Calr4Q3TQS0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Calr4Q3TQS0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Calr4Q3TQS0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Calr4Q3TQS0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Calr4Q3TQS0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Calr4Q3TQS0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Gm12527-201ENSMUST00000117967 564 ntBASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Calr4Q3TQS0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Calr4Q3TQS0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Calr4Q3TQS0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Calr4Q3TQS0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC20.29■□□□□ 0.84
Calr4Q3TQS0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Calr4Q3TQS0 Gm12441-201ENSMUST00000121806 588 ntBASIC20.29■□□□□ 0.84
Calr4Q3TQS0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.29■□□□□ 0.84
Calr4Q3TQS0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.29■□□□□ 0.84
Calr4Q3TQS0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Calr4Q3TQS0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Calr4Q3TQS0 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.29■□□□□ 0.84
Calr4Q3TQS0 Gm7370-201ENSMUST00000219471 767 ntBASIC20.29■□□□□ 0.84
Calr4Q3TQS0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Calr4Q3TQS0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Calr4Q3TQS0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Calr4Q3TQS0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Calr4Q3TQS0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Calr4Q3TQS0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Calr4Q3TQS0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Calr4Q3TQS0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Calr4Q3TQS0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC20.29■□□□□ 0.84
Calr4Q3TQS0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Calr4Q3TQS0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Calr4Q3TQS0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Calr4Q3TQS0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Calr4Q3TQS0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC20.28■□□□□ 0.84
Calr4Q3TQS0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Calr4Q3TQS0 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.28■□□□□ 0.84
Calr4Q3TQS0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.28■□□□□ 0.84
Calr4Q3TQS0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Calr4Q3TQS0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Calr4Q3TQS0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Calr4Q3TQS0 Gm10566-201ENSMUST00000086739 996 ntBASIC20.28■□□□□ 0.84
Calr4Q3TQS0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Calr4Q3TQS0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Calr4Q3TQS0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Calr4Q3TQS0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Calr4Q3TQS0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Calr4Q3TQS0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Calr4Q3TQS0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Calr4Q3TQS0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Calr4Q3TQS0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Calr4Q3TQS0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Calr4Q3TQS0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Calr4Q3TQS0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Calr4Q3TQS0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
Calr4Q3TQS0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Calr4Q3TQS0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Calr4Q3TQS0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Calr4Q3TQS0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Calr4Q3TQS0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Calr4Q3TQS0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.27■□□□□ 0.84
Calr4Q3TQS0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.27■□□□□ 0.84
Calr4Q3TQS0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Calr4Q3TQS0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Calr4Q3TQS0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Calr4Q3TQS0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Calr4Q3TQS0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Calr4Q3TQS0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Calr4Q3TQS0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Calr4Q3TQS0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Calr4Q3TQS0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC20.27■□□□□ 0.83
Calr4Q3TQS0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Calr4Q3TQS0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms