Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC23.68■■□□□ 1.38
Col17a1Q07563 Gm17794-201ENSMUST00000220252 955 ntBASIC23.68■■□□□ 1.38
Col17a1Q07563 AC110817.1-201ENSMUST00000225706 605 ntBASIC23.68■■□□□ 1.38
Col17a1Q07563 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col17a1Q07563 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC23.68■■□□□ 1.38
Col17a1Q07563 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col17a1Q07563 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC23.68■■□□□ 1.38
Col17a1Q07563 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col17a1Q07563 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Col17a1Q07563 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Col17a1Q07563 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Col17a1Q07563 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC23.68■■□□□ 1.38
Col17a1Q07563 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Col17a1Q07563 Gm7558-201ENSMUST00000193221 1165 ntBASIC23.68■■□□□ 1.38
Col17a1Q07563 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
Col17a1Q07563 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC23.68■■□□□ 1.38
Col17a1Q07563 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Col17a1Q07563 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC23.68■■□□□ 1.38
Col17a1Q07563 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col17a1Q07563 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col17a1Q07563 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col17a1Q07563 Gm15808-201ENSMUST00000119046 604 ntBASIC23.67■■□□□ 1.38
Col17a1Q07563 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Col17a1Q07563 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC23.67■■□□□ 1.38
Col17a1Q07563 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC23.67■■□□□ 1.38
Col17a1Q07563 CU024892.2-201ENSMUST00000224608 832 ntBASIC23.67■■□□□ 1.38
Col17a1Q07563 Gm17383-201ENSMUST00000078739 1041 ntBASIC23.67■■□□□ 1.38
Col17a1Q07563 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC23.67■■□□□ 1.38
Col17a1Q07563 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col17a1Q07563 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col17a1Q07563 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Col17a1Q07563 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC23.66■■□□□ 1.38
Col17a1Q07563 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC23.66■■□□□ 1.38
Col17a1Q07563 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Col17a1Q07563 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col17a1Q07563 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC23.66■■□□□ 1.38
Col17a1Q07563 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC23.66■■□□□ 1.38
Col17a1Q07563 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC23.66■■□□□ 1.38
Col17a1Q07563 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col17a1Q07563 Gm3695-201ENSMUST00000087222 1009 ntBASIC23.66■■□□□ 1.38
Col17a1Q07563 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col17a1Q07563 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col17a1Q07563 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col17a1Q07563 AC164565.1-201ENSMUST00000217520 1484 ntBASIC23.66■■□□□ 1.38
Col17a1Q07563 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col17a1Q07563 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col17a1Q07563 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col17a1Q07563 Gm5187-201ENSMUST00000117317 991 ntBASIC23.65■■□□□ 1.38
Col17a1Q07563 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
Col17a1Q07563 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Col17a1Q07563 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col17a1Q07563 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col17a1Q07563 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Col17a1Q07563 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Col17a1Q07563 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC23.65■■□□□ 1.38
Col17a1Q07563 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col17a1Q07563 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col17a1Q07563 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC23.65■■□□□ 1.38
Col17a1Q07563 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Col17a1Q07563 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Col17a1Q07563 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Col17a1Q07563 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC23.64■■□□□ 1.38
Col17a1Q07563 Mir692-1-201ENSMUST00000102263 109 ntBASIC23.64■■□□□ 1.38
Col17a1Q07563 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC23.64■■□□□ 1.38
Col17a1Q07563 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Col17a1Q07563 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Col17a1Q07563 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Col17a1Q07563 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC23.64■■□□□ 1.38
Col17a1Q07563 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC23.64■■□□□ 1.38
Col17a1Q07563 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Col17a1Q07563 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
Col17a1Q07563 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Col17a1Q07563 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Col17a1Q07563 Gm7993-201ENSMUST00000200970 1384 ntBASIC23.64■■□□□ 1.37
Col17a1Q07563 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Col17a1Q07563 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC23.64■■□□□ 1.37
Col17a1Q07563 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Col17a1Q07563 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col17a1Q07563 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC23.63■■□□□ 1.37
Col17a1Q07563 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
Col17a1Q07563 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC23.63■■□□□ 1.37
Col17a1Q07563 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC23.63■■□□□ 1.37
Col17a1Q07563 Gm6013-201ENSMUST00000212264 699 ntBASIC23.63■■□□□ 1.37
Col17a1Q07563 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC23.63■■□□□ 1.37
Col17a1Q07563 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Col17a1Q07563 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col17a1Q07563 Fam105a-203ENSMUST00000226170 3043 ntBASIC23.63■■□□□ 1.37
Col17a1Q07563 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col17a1Q07563 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Col17a1Q07563 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col17a1Q07563 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col17a1Q07563 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Col17a1Q07563 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col17a1Q07563 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col17a1Q07563 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Col17a1Q07563 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col17a1Q07563 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
Col17a1Q07563 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col17a1Q07563 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Col17a1Q07563 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms