Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.36□□□□□ -0.11
Col10a1Q05306 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.36□□□□□ -0.11
Col10a1Q05306 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col10a1Q05306 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Col10a1Q05306 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Col10a1Q05306 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col10a1Q05306 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col10a1Q05306 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col10a1Q05306 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col10a1Q05306 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Col10a1Q05306 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Col10a1Q05306 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Col10a1Q05306 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col10a1Q05306 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col10a1Q05306 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.36□□□□□ -0.11
Col10a1Q05306 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col10a1Q05306 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.35□□□□□ -0.11
Col10a1Q05306 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.35□□□□□ -0.11
Col10a1Q05306 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.35□□□□□ -0.11
Col10a1Q05306 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.35□□□□□ -0.11
Col10a1Q05306 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.35□□□□□ -0.11
Col10a1Q05306 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Col10a1Q05306 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 Gm11780-201ENSMUST00000136880 516 ntBASIC14.35□□□□□ -0.11
Col10a1Q05306 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.35□□□□□ -0.11
Col10a1Q05306 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col10a1Q05306 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Col10a1Q05306 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col10a1Q05306 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Col10a1Q05306 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col10a1Q05306 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col10a1Q05306 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col10a1Q05306 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col10a1Q05306 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col10a1Q05306 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col10a1Q05306 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.34□□□□□ -0.11
Col10a1Q05306 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col10a1Q05306 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col10a1Q05306 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col10a1Q05306 Gm13884-201ENSMUST00000118103 829 ntBASIC14.34□□□□□ -0.11
Col10a1Q05306 Gm8344-201ENSMUST00000119813 856 ntBASIC14.34□□□□□ -0.11
Col10a1Q05306 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.34□□□□□ -0.11
Col10a1Q05306 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.34□□□□□ -0.11
Col10a1Q05306 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.34□□□□□ -0.11
Col10a1Q05306 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col10a1Q05306 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.34□□□□□ -0.11
Col10a1Q05306 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.34□□□□□ -0.11
Col10a1Q05306 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col10a1Q05306 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col10a1Q05306 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.34□□□□□ -0.11
Col10a1Q05306 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Col10a1Q05306 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col10a1Q05306 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col10a1Q05306 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Col10a1Q05306 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col10a1Q05306 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col10a1Q05306 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col10a1Q05306 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Col10a1Q05306 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Col10a1Q05306 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col10a1Q05306 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col10a1Q05306 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Col10a1Q05306 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Col10a1Q05306 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col10a1Q05306 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Col10a1Q05306 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col10a1Q05306 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col10a1Q05306 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col10a1Q05306 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Col10a1Q05306 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.33□□□□□ -0.12
Col10a1Q05306 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col10a1Q05306 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.33□□□□□ -0.12
Col10a1Q05306 Gm19164-201ENSMUST00000210667 640 ntBASIC14.33□□□□□ -0.12
Col10a1Q05306 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col10a1Q05306 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col10a1Q05306 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col10a1Q05306 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col10a1Q05306 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Col10a1Q05306 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col10a1Q05306 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms