Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Smn1P97801 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
Smn1P97801 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.37□□□□□ -0.27
Smn1P97801 Mir5130-201ENSMUST00000175160 84 ntBASIC13.37□□□□□ -0.27
Smn1P97801 Gm22240-201ENSMUST00000175225 82 ntBASIC13.37□□□□□ -0.27
Smn1P97801 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.37□□□□□ -0.27
Smn1P97801 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Smn1P97801 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.36□□□□□ -0.27
Smn1P97801 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Smn1P97801 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.36□□□□□ -0.27
Smn1P97801 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Smn1P97801 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.36□□□□□ -0.27
Smn1P97801 Gm10052-201ENSMUST00000168019 960 ntBASIC13.36□□□□□ -0.27
Smn1P97801 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.36□□□□□ -0.27
Smn1P97801 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Gm7729-201ENSMUST00000050143 801 ntBASIC13.36□□□□□ -0.27
Smn1P97801 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.36□□□□□ -0.27
Smn1P97801 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.36□□□□□ -0.27
Smn1P97801 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smn1P97801 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smn1P97801 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smn1P97801 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Smn1P97801 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smn1P97801 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smn1P97801 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smn1P97801 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smn1P97801 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.35□□□□□ -0.27
Smn1P97801 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smn1P97801 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Smn1P97801 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smn1P97801 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Smn1P97801 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smn1P97801 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Smn1P97801 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.35□□□□□ -0.27
Smn1P97801 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smn1P97801 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.35□□□□□ -0.27
Smn1P97801 Gm37055-201ENSMUST00000191866 133 ntBASIC13.35□□□□□ -0.27
Smn1P97801 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.35□□□□□ -0.27
Smn1P97801 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.35□□□□□ -0.27
Smn1P97801 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smn1P97801 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Smn1P97801 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smn1P97801 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smn1P97801 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smn1P97801 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smn1P97801 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smn1P97801 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.35□□□□□ -0.27
Smn1P97801 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smn1P97801 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smn1P97801 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smn1P97801 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smn1P97801 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smn1P97801 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smn1P97801 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smn1P97801 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smn1P97801 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Smn1P97801 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smn1P97801 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Smn1P97801 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms