Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx2-3P97334 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Nkx2-3P97334 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Nkx2-3P97334 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-3P97334 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.49■□□□□ 0.71
Nkx2-3P97334 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Nkx2-3P97334 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-3P97334 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-3P97334 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-3P97334 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-3P97334 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC19.49■□□□□ 0.71
Nkx2-3P97334 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC19.49■□□□□ 0.71
Nkx2-3P97334 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-3P97334 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-3P97334 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC19.49■□□□□ 0.71
Nkx2-3P97334 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-3P97334 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-3P97334 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
Nkx2-3P97334 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-3P97334 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Nkx2-3P97334 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-3P97334 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-3P97334 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Nkx2-3P97334 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
Nkx2-3P97334 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-3P97334 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC19.48■□□□□ 0.71
Nkx2-3P97334 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-3P97334 Gm22175-201ENSMUST00000175007 78 ntBASIC19.48■□□□□ 0.71
Nkx2-3P97334 Gm38294-201ENSMUST00000192831 381 ntBASIC19.48■□□□□ 0.71
Nkx2-3P97334 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-3P97334 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-3P97334 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-3P97334 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
Nkx2-3P97334 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-3P97334 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-3P97334 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Nkx2-3P97334 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.47■□□□□ 0.71
Nkx2-3P97334 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-3P97334 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-3P97334 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-3P97334 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC19.47■□□□□ 0.71
Nkx2-3P97334 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC19.47■□□□□ 0.71
Nkx2-3P97334 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-3P97334 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-3P97334 Gm6973-201ENSMUST00000117080 721 ntBASIC19.47■□□□□ 0.71
Nkx2-3P97334 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-3P97334 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Nkx2-3P97334 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-3P97334 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-3P97334 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC19.47■□□□□ 0.71
Nkx2-3P97334 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.47■□□□□ 0.71
Nkx2-3P97334 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nkx2-3P97334 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-3P97334 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-3P97334 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-3P97334 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-3P97334 AC154767.3-201ENSMUST00000225150 1342 ntBASIC19.47■□□□□ 0.71
Nkx2-3P97334 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-3P97334 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Nkx2-3P97334 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.46■□□□□ 0.71
Nkx2-3P97334 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-3P97334 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-3P97334 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC19.46■□□□□ 0.71
Nkx2-3P97334 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-3P97334 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-3P97334 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-3P97334 App-207ENSMUST00000227737 2827 ntBASIC19.46■□□□□ 0.71
Nkx2-3P97334 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-3P97334 Gm7336-201ENSMUST00000107041 1232 ntBASIC19.46■□□□□ 0.71
Nkx2-3P97334 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Nkx2-3P97334 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-3P97334 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-3P97334 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-3P97334 Gm5779-201ENSMUST00000218467 910 ntBASIC19.46■□□□□ 0.71
Nkx2-3P97334 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-3P97334 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-3P97334 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-3P97334 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-3P97334 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-3P97334 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-3P97334 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-3P97334 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-3P97334 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.46■□□□□ 0.71
Nkx2-3P97334 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.46■□□□□ 0.71
Nkx2-3P97334 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-3P97334 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-3P97334 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-3P97334 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-3P97334 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Nkx2-3P97334 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-3P97334 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-3P97334 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Nkx2-3P97334 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-3P97334 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Nkx2-3P97334 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC19.45■□□□□ 0.7
Nkx2-3P97334 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-3P97334 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Nkx2-3P97334 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-3P97334 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-3P97334 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms