Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp9xP70398 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp9xP70398 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC12.84□□□□□ -0.35
Usp9xP70398 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp9xP70398 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp9xP70398 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp9xP70398 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Usp9xP70398 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp9xP70398 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp9xP70398 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp9xP70398 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp9xP70398 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp9xP70398 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp9xP70398 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Usp9xP70398 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Usp9xP70398 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.83□□□□□ -0.35
Usp9xP70398 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Usp9xP70398 AY702102-202ENSMUST00000194651 1173 ntBASIC12.83□□□□□ -0.35
Usp9xP70398 Gm45384-201ENSMUST00000210451 277 ntBASIC12.83□□□□□ -0.35
Usp9xP70398 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Usp9xP70398 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Usp9xP70398 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Usp9xP70398 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp9xP70398 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp9xP70398 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp9xP70398 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp9xP70398 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp9xP70398 Gm6745-201ENSMUST00000199216 526 ntBASIC12.83□□□□□ -0.36
Usp9xP70398 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp9xP70398 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp9xP70398 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp9xP70398 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Usp9xP70398 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp9xP70398 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp9xP70398 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp9xP70398 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp9xP70398 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.83□□□□□ -0.36
Usp9xP70398 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.83□□□□□ -0.36
Usp9xP70398 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp9xP70398 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp9xP70398 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Usp9xP70398 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Gm22189-201ENSMUST00000103822 86 ntBASIC12.82□□□□□ -0.36
Usp9xP70398 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.82□□□□□ -0.36
Usp9xP70398 Rarb-207ENSMUST00000225921 2756 ntBASIC12.82□□□□□ -0.36
Usp9xP70398 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Usp9xP70398 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Usp9xP70398 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Usp9xP70398 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.82□□□□□ -0.36
Usp9xP70398 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Usp9xP70398 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Usp9xP70398 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp9xP70398 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.81□□□□□ -0.36
Usp9xP70398 Gm27533-201ENSMUST00000183800 152 ntBASIC12.81□□□□□ -0.36
Usp9xP70398 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.81□□□□□ -0.36
Usp9xP70398 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.81□□□□□ -0.36
Usp9xP70398 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.81□□□□□ -0.36
Usp9xP70398 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Usp9xP70398 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Usp9xP70398 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Gm7775-201ENSMUST00000218871 853 ntBASIC12.81□□□□□ -0.36
Usp9xP70398 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms