Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.66□□□□□ -0.22
Lsm6P62313 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.66□□□□□ -0.22
Lsm6P62313 Gm18622-201ENSMUST00000219361 595 ntBASIC13.66□□□□□ -0.22
Lsm6P62313 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm6P62313 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.66□□□□□ -0.22
Lsm6P62313 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm6P62313 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.66□□□□□ -0.22
Lsm6P62313 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.66□□□□□ -0.22
Lsm6P62313 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Lsm6P62313 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm6P62313 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lsm6P62313 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm6P62313 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm6P62313 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.65□□□□□ -0.22
Lsm6P62313 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Lsm6P62313 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.65□□□□□ -0.22
Lsm6P62313 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Lsm6P62313 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Lsm6P62313 Gm7506-201ENSMUST00000207758 815 ntBASIC13.65□□□□□ -0.22
Lsm6P62313 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Lsm6P62313 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.65□□□□□ -0.22
Lsm6P62313 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.65□□□□□ -0.22
Lsm6P62313 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Lsm6P62313 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Lsm6P62313 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Lsm6P62313 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm6P62313 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.65□□□□□ -0.23
Lsm6P62313 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm6P62313 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Lsm6P62313 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm6P62313 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm6P62313 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm6P62313 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm6P62313 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm6P62313 Gm12644-201ENSMUST00000119935 606 ntBASIC13.64□□□□□ -0.23
Lsm6P62313 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.64□□□□□ -0.23
Lsm6P62313 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.64□□□□□ -0.23
Lsm6P62313 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.64□□□□□ -0.23
Lsm6P62313 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.64□□□□□ -0.23
Lsm6P62313 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm6P62313 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm6P62313 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm6P62313 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm6P62313 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm6P62313 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm6P62313 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm6P62313 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm6P62313 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm6P62313 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm6P62313 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm6P62313 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm6P62313 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm6P62313 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Lsm6P62313 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm6P62313 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm6P62313 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm6P62313 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm6P62313 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm6P62313 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.63□□□□□ -0.23
Lsm6P62313 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.63□□□□□ -0.23
Lsm6P62313 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.63□□□□□ -0.23
Lsm6P62313 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lsm6P62313 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Lsm6P62313 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.63□□□□□ -0.23
Lsm6P62313 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm6P62313 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Lsm6P62313 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm6P62313 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm6P62313 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Lsm6P62313 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm6P62313 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.63□□□□□ -0.23
Lsm6P62313 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm6P62313 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Lsm6P62313 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm6P62313 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm6P62313 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms