Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Lsm3P62311 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm3P62311 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm3P62311 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm3P62311 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm3P62311 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm3P62311 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.26□□□□□ -0.13
Lsm3P62311 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm3P62311 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lsm3P62311 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm3P62311 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.26□□□□□ -0.13
Lsm3P62311 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Lsm3P62311 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.26□□□□□ -0.13
Lsm3P62311 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lsm3P62311 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm3P62311 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.26□□□□□ -0.13
Lsm3P62311 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Lsm3P62311 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Lsm3P62311 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.26□□□□□ -0.13
Lsm3P62311 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Lsm3P62311 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm3P62311 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm3P62311 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm3P62311 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm3P62311 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Lsm3P62311 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lsm3P62311 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.25□□□□□ -0.13
Lsm3P62311 Gm12896-201ENSMUST00000118430 226 ntBASIC14.25□□□□□ -0.13
Lsm3P62311 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.25□□□□□ -0.13
Lsm3P62311 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Lsm3P62311 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm3P62311 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Lsm3P62311 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm3P62311 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm3P62311 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Lsm3P62311 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm3P62311 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm3P62311 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm3P62311 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.24□□□□□ -0.13
Lsm3P62311 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm3P62311 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm3P62311 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Lsm3P62311 Gm7638-201ENSMUST00000121348 967 ntBASIC14.24□□□□□ -0.13
Lsm3P62311 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.24□□□□□ -0.13
Lsm3P62311 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.24□□□□□ -0.13
Lsm3P62311 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.24□□□□□ -0.13
Lsm3P62311 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm3P62311 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm3P62311 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm3P62311 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm3P62311 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm3P62311 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm3P62311 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.24□□□□□ -0.13
Lsm3P62311 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lsm3P62311 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm3P62311 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.24□□□□□ -0.13
Lsm3P62311 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Lsm3P62311 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm3P62311 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm3P62311 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm3P62311 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Lsm3P62311 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm3P62311 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm3P62311 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.23□□□□□ -0.13
Lsm3P62311 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lsm3P62311 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm3P62311 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Lsm3P62311 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm3P62311 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm3P62311 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm3P62311 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm3P62311 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm3P62311 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm3P62311 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm3P62311 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms