Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Nphp4P59240 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nphp4P59240 AC163637.1-201ENSMUST00000215491 1894 ntBASIC20.95■□□□□ 0.94
Nphp4P59240 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Nphp4P59240 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nphp4P59240 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Nphp4P59240 Mir6956-201ENSMUST00000183598 62 ntBASIC20.95■□□□□ 0.94
Nphp4P59240 AC159114.1-201ENSMUST00000220349 266 ntBASIC20.95■□□□□ 0.94
Nphp4P59240 CT010506.4-201ENSMUST00000225457 351 ntBASIC20.95■□□□□ 0.94
Nphp4P59240 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nphp4P59240 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC20.95■□□□□ 0.94
Nphp4P59240 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nphp4P59240 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nphp4P59240 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Nphp4P59240 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nphp4P59240 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nphp4P59240 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nphp4P59240 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Nphp4P59240 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nphp4P59240 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nphp4P59240 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nphp4P59240 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nphp4P59240 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nphp4P59240 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nphp4P59240 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nphp4P59240 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Nphp4P59240 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC20.94■□□□□ 0.94
Nphp4P59240 Gm25948-201ENSMUST00000175334 112 ntBASIC20.94■□□□□ 0.94
Nphp4P59240 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nphp4P59240 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC20.94■□□□□ 0.94
Nphp4P59240 AC131187.1-201ENSMUST00000224567 809 ntBASIC20.94■□□□□ 0.94
Nphp4P59240 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nphp4P59240 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nphp4P59240 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nphp4P59240 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Nphp4P59240 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Nphp4P59240 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nphp4P59240 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Nphp4P59240 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nphp4P59240 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nphp4P59240 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nphp4P59240 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC20.93■□□□□ 0.94
Nphp4P59240 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Nphp4P59240 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nphp4P59240 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nphp4P59240 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nphp4P59240 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nphp4P59240 Dancr-204ENSMUST00000132389 2347 ntBASIC20.93■□□□□ 0.94
Nphp4P59240 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Nphp4P59240 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nphp4P59240 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Nphp4P59240 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nphp4P59240 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nphp4P59240 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
Nphp4P59240 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nphp4P59240 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nphp4P59240 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nphp4P59240 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nphp4P59240 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nphp4P59240 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Nphp4P59240 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nphp4P59240 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nphp4P59240 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Nphp4P59240 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC20.92■□□□□ 0.94
Nphp4P59240 Gm10576-201ENSMUST00000191927 825 ntBASIC20.92■□□□□ 0.94
Nphp4P59240 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC20.92■□□□□ 0.94
Nphp4P59240 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nphp4P59240 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nphp4P59240 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nphp4P59240 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nphp4P59240 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nphp4P59240 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC20.92■□□□□ 0.94
Nphp4P59240 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nphp4P59240 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Nphp4P59240 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nphp4P59240 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nphp4P59240 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC20.91■□□□□ 0.94
Nphp4P59240 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC20.91■□□□□ 0.94
Nphp4P59240 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nphp4P59240 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nphp4P59240 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nphp4P59240 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nphp4P59240 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.91■□□□□ 0.94
Nphp4P59240 AC139382.1-201ENSMUST00000221402 498 ntBASIC20.91■□□□□ 0.94
Nphp4P59240 AC131710.1-201ENSMUST00000228336 990 ntBASIC20.91■□□□□ 0.94
Nphp4P59240 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nphp4P59240 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nphp4P59240 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC20.91■□□□□ 0.94
Nphp4P59240 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nphp4P59240 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nphp4P59240 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nphp4P59240 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC20.9■□□□□ 0.94
Nphp4P59240 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nphp4P59240 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nphp4P59240 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC20.9■□□□□ 0.94
Nphp4P59240 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nphp4P59240 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Nphp4P59240 Gm43767-201ENSMUST00000198933 381 ntBASIC20.9■□□□□ 0.94
Nphp4P59240 Gm44872-201ENSMUST00000207864 420 ntBASIC20.9■□□□□ 0.94
Nphp4P59240 AC140397.2-201ENSMUST00000224213 834 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms