Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab4aP56371 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.31□□□□□ -0.44
Rab4aP56371 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rab4aP56371 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Rab4aP56371 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Gm25927-201ENSMUST00000175058 117 ntBASIC12.31□□□□□ -0.44
Rab4aP56371 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.31□□□□□ -0.44
Rab4aP56371 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC12.31□□□□□ -0.44
Rab4aP56371 Gm44549-201ENSMUST00000208351 577 ntBASIC12.31□□□□□ -0.44
Rab4aP56371 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC12.31□□□□□ -0.44
Rab4aP56371 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.31□□□□□ -0.44
Rab4aP56371 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.31□□□□□ -0.44
Rab4aP56371 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab4aP56371 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Rab4aP56371 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Rab4aP56371 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Rab4aP56371 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rab4aP56371 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rab4aP56371 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.3□□□□□ -0.44
Rab4aP56371 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.3□□□□□ -0.44
Rab4aP56371 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Rab4aP56371 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rab4aP56371 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Rab4aP56371 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.3□□□□□ -0.44
Rab4aP56371 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.3□□□□□ -0.44
Rab4aP56371 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab4aP56371 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab4aP56371 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab4aP56371 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab4aP56371 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rab4aP56371 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab4aP56371 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab4aP56371 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab4aP56371 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab4aP56371 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab4aP56371 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab4aP56371 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab4aP56371 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab4aP56371 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab4aP56371 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rab4aP56371 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Rab4aP56371 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.29□□□□□ -0.44
Rab4aP56371 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rab4aP56371 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.29□□□□□ -0.44
Rab4aP56371 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.29□□□□□ -0.44
Rab4aP56371 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab4aP56371 Gm6365-201ENSMUST00000054711 744 ntBASIC12.29□□□□□ -0.44
Rab4aP56371 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab4aP56371 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab4aP56371 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab4aP56371 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Rab4aP56371 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms