Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC10.16□□□□□ -0.78
Xcl1P47993 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC10.16□□□□□ -0.78
Xcl1P47993 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Xcl1P47993 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC10.16□□□□□ -0.78
Xcl1P47993 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC10.16□□□□□ -0.78
Xcl1P47993 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Xcl1P47993 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Xcl1P47993 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Xcl1P47993 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC10.16□□□□□ -0.78
Xcl1P47993 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC10.16□□□□□ -0.78
Xcl1P47993 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Xcl1P47993 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Xcl1P47993 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Xcl1P47993 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Xcl1P47993 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Xcl1P47993 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Xcl1P47993 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC10.15□□□□□ -0.78
Xcl1P47993 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Xcl1P47993 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Xcl1P47993 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Xcl1P47993 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Xcl1P47993 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Xcl1P47993 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Xcl1P47993 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Xcl1P47993 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Xcl1P47993 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Xcl1P47993 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Xcl1P47993 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Xcl1P47993 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Xcl1P47993 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Xcl1P47993 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Xcl1P47993 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Xcl1P47993 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Xcl1P47993 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Xcl1P47993 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Xcl1P47993 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC10.15□□□□□ -0.78
Xcl1P47993 Gm22238-201ENSMUST00000175222 88 ntBASIC10.15□□□□□ -0.78
Xcl1P47993 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Xcl1P47993 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Xcl1P47993 Gm5522-201ENSMUST00000189483 1242 ntBASIC10.15□□□□□ -0.78
Xcl1P47993 Gm9207-201ENSMUST00000198773 1115 ntBASIC10.15□□□□□ -0.78
Xcl1P47993 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC10.15□□□□□ -0.78
Xcl1P47993 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Xcl1P47993 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC10.15□□□□□ -0.78
Xcl1P47993 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Xcl1P47993 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Xcl1P47993 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Xcl1P47993 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Xcl1P47993 Ntrk2-209ENSMUST00000225950 2640 ntBASIC10.15□□□□□ -0.79
Xcl1P47993 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Xcl1P47993 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Xcl1P47993 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Xcl1P47993 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Xcl1P47993 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Xcl1P47993 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Xcl1P47993 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Xcl1P47993 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.14□□□□□ -0.79
Xcl1P47993 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Xcl1P47993 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Xcl1P47993 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Xcl1P47993 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Xcl1P47993 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Xcl1P47993 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Xcl1P47993 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Xcl1P47993 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Xcl1P47993 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Xcl1P47993 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Xcl1P47993 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Xcl1P47993 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC10.14□□□□□ -0.79
Xcl1P47993 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Xcl1P47993 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Xcl1P47993 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Xcl1P47993 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Xcl1P47993 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Xcl1P47993 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Xcl1P47993 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC10.14□□□□□ -0.79
Xcl1P47993 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Xcl1P47993 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms