Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Vps4bP46467 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.8■□□□□ 0.12
Vps4bP46467 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Vps4bP46467 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.8■□□□□ 0.12
Vps4bP46467 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.8■□□□□ 0.12
Vps4bP46467 Rprl3-201ENSMUST00000157400 290 ntBASIC15.8■□□□□ 0.12
Vps4bP46467 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.8■□□□□ 0.12
Vps4bP46467 Gm27704-201ENSMUST00000185094 107 ntBASIC15.8■□□□□ 0.12
Vps4bP46467 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.8■□□□□ 0.12
Vps4bP46467 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Vps4bP46467 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.8■□□□□ 0.12
Vps4bP46467 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4bP46467 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4bP46467 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4bP46467 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4bP46467 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Vps4bP46467 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.79■□□□□ 0.12
Vps4bP46467 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4bP46467 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4bP46467 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4bP46467 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4bP46467 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4bP46467 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4bP46467 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.79■□□□□ 0.12
Vps4bP46467 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4bP46467 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.79■□□□□ 0.12
Vps4bP46467 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4bP46467 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4bP46467 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.79■□□□□ 0.12
Vps4bP46467 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4bP46467 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4bP46467 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Vps4bP46467 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4bP46467 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4bP46467 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4bP46467 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4bP46467 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4bP46467 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4bP46467 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4bP46467 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Vps4bP46467 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4bP46467 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4bP46467 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4bP46467 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4bP46467 Gm7153-201ENSMUST00000117092 455 ntBASIC15.78■□□□□ 0.12
Vps4bP46467 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Vps4bP46467 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4bP46467 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4bP46467 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4bP46467 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Vps4bP46467 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4bP46467 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4bP46467 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4bP46467 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Vps4bP46467 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4bP46467 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4bP46467 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4bP46467 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4bP46467 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4bP46467 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4bP46467 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps4bP46467 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps4bP46467 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vps4bP46467 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps4bP46467 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps4bP46467 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.77■□□□□ 0.12
Vps4bP46467 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.77■□□□□ 0.12
Vps4bP46467 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.77■□□□□ 0.12
Vps4bP46467 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps4bP46467 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps4bP46467 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Vps4bP46467 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.77■□□□□ 0.12
Vps4bP46467 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Vps4bP46467 Gm17807-201ENSMUST00000186869 298 ntBASIC15.77■□□□□ 0.12
Vps4bP46467 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.77■□□□□ 0.12
Vps4bP46467 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps4bP46467 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms