Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox5P35710 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Sox5P35710 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox5P35710 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox5P35710 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Sox5P35710 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Sox5P35710 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox5P35710 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox5P35710 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox5P35710 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Sox5P35710 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox5P35710 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox5P35710 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox5P35710 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox5P35710 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Sox5P35710 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox5P35710 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox5P35710 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Sox5P35710 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Sox5P35710 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.99■□□□□ 0.31
Sox5P35710 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.99■□□□□ 0.31
Sox5P35710 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox5P35710 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox5P35710 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox5P35710 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox5P35710 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox5P35710 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Sox5P35710 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox5P35710 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox5P35710 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.99■□□□□ 0.31
Sox5P35710 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.99■□□□□ 0.31
Sox5P35710 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox5P35710 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox5P35710 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox5P35710 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox5P35710 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox5P35710 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.98■□□□□ 0.31
Sox5P35710 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox5P35710 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Sox5P35710 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox5P35710 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.98■□□□□ 0.31
Sox5P35710 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Sox5P35710 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox5P35710 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Sox5P35710 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sox5P35710 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.98■□□□□ 0.31
Sox5P35710 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.98■□□□□ 0.31
Sox5P35710 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox5P35710 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sox5P35710 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Sox5P35710 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox5P35710 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Sox5P35710 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Sox5P35710 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox5P35710 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Sox5P35710 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox5P35710 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Sox5P35710 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox5P35710 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.98■□□□□ 0.31
Sox5P35710 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox5P35710 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox5P35710 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox5P35710 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox5P35710 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox5P35710 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Sox5P35710 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox5P35710 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sox5P35710 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sox5P35710 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox5P35710 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.97■□□□□ 0.31
Sox5P35710 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox5P35710 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Sox5P35710 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox5P35710 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox5P35710 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox5P35710 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sox5P35710 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Sox5P35710 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox5P35710 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Sox5P35710 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox5P35710 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Sox5P35710 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Sox5P35710 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox5P35710 Gm15794-201ENSMUST00000120182 631 ntBASIC16.97■□□□□ 0.31
Sox5P35710 Gm11950-201ENSMUST00000121615 838 ntBASIC16.97■□□□□ 0.31
Sox5P35710 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.97■□□□□ 0.31
Sox5P35710 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Sox5P35710 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Sox5P35710 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.97■□□□□ 0.31
Sox5P35710 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sox5P35710 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox5P35710 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox5P35710 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.97■□□□□ 0.31
Sox5P35710 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Sox5P35710 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox5P35710 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sox5P35710 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sox5P35710 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sox5P35710 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox5P35710 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms