Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Foxa1P35582 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Foxa1P35582 Gm27741-201ENSMUST00000185060 237 ntBASIC14.39□□□□□ -0.11
Foxa1P35582 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.39□□□□□ -0.11
Foxa1P35582 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.39□□□□□ -0.11
Foxa1P35582 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.39□□□□□ -0.11
Foxa1P35582 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxa1P35582 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Foxa1P35582 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxa1P35582 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxa1P35582 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxa1P35582 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxa1P35582 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxa1P35582 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxa1P35582 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxa1P35582 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxa1P35582 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Foxa1P35582 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxa1P35582 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxa1P35582 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxa1P35582 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxa1P35582 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxa1P35582 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxa1P35582 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.38□□□□□ -0.11
Foxa1P35582 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxa1P35582 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxa1P35582 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Foxa1P35582 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxa1P35582 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxa1P35582 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Foxa1P35582 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.38□□□□□ -0.11
Foxa1P35582 Gm25990-201ENSMUST00000102440 86 ntBASIC14.38□□□□□ -0.11
Foxa1P35582 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.38□□□□□ -0.11
Foxa1P35582 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.38□□□□□ -0.11
Foxa1P35582 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxa1P35582 Gm27646-201ENSMUST00000183989 110 ntBASIC14.38□□□□□ -0.11
Foxa1P35582 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.38□□□□□ -0.11
Foxa1P35582 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxa1P35582 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxa1P35582 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxa1P35582 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.38□□□□□ -0.11
Foxa1P35582 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.38□□□□□ -0.11
Foxa1P35582 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxa1P35582 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxa1P35582 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Foxa1P35582 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxa1P35582 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.38□□□□□ -0.11
Foxa1P35582 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxa1P35582 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Foxa1P35582 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxa1P35582 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Foxa1P35582 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxa1P35582 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxa1P35582 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Foxa1P35582 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxa1P35582 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.37□□□□□ -0.11
Foxa1P35582 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxa1P35582 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Foxa1P35582 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Foxa1P35582 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Foxa1P35582 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Foxa1P35582 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.37□□□□□ -0.11
Foxa1P35582 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.37□□□□□ -0.11
Foxa1P35582 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.37□□□□□ -0.11
Foxa1P35582 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.37□□□□□ -0.11
Foxa1P35582 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxa1P35582 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxa1P35582 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Foxa1P35582 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.37□□□□□ -0.11
Foxa1P35582 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxa1P35582 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxa1P35582 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxa1P35582 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Foxa1P35582 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxa1P35582 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxa1P35582 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxa1P35582 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxa1P35582 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxa1P35582 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.36□□□□□ -0.11
Foxa1P35582 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxa1P35582 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Foxa1P35582 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxa1P35582 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Foxa1P35582 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxa1P35582 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Foxa1P35582 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Foxa1P35582 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.36□□□□□ -0.11
Foxa1P35582 Gm15358-201ENSMUST00000119249 520 ntBASIC14.36□□□□□ -0.11
Foxa1P35582 Gm7862-201ENSMUST00000121461 292 ntBASIC14.36□□□□□ -0.11
Foxa1P35582 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.36□□□□□ -0.11
Foxa1P35582 Gm6089-201ENSMUST00000197666 938 ntBASIC14.36□□□□□ -0.11
Foxa1P35582 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxa1P35582 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Foxa1P35582 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.36□□□□□ -0.11
Foxa1P35582 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.36□□□□□ -0.11
Foxa1P35582 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.36□□□□□ -0.11
Foxa1P35582 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxa1P35582 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxa1P35582 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Foxa1P35582 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms