Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Thbs1P35441 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.38□□□□□ -0.11
Thbs1P35441 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.38□□□□□ -0.11
Thbs1P35441 Gm19164-201ENSMUST00000210667 640 ntBASIC14.38□□□□□ -0.11
Thbs1P35441 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.38□□□□□ -0.11
Thbs1P35441 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Thbs1P35441 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.37□□□□□ -0.11
Thbs1P35441 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Gm7153-201ENSMUST00000117092 455 ntBASIC14.37□□□□□ -0.11
Thbs1P35441 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Gm27867-201ENSMUST00000184778 125 ntBASIC14.37□□□□□ -0.11
Thbs1P35441 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.37□□□□□ -0.11
Thbs1P35441 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC14.37□□□□□ -0.11
Thbs1P35441 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.37□□□□□ -0.11
Thbs1P35441 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Thbs1P35441 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thbs1P35441 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Thbs1P35441 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Thbs1P35441 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thbs1P35441 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thbs1P35441 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thbs1P35441 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thbs1P35441 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Thbs1P35441 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Thbs1P35441 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thbs1P35441 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Thbs1P35441 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thbs1P35441 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thbs1P35441 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thbs1P35441 Gm4459-201ENSMUST00000118750 468 ntBASIC14.36□□□□□ -0.11
Thbs1P35441 Gm8344-201ENSMUST00000119813 856 ntBASIC14.36□□□□□ -0.11
Thbs1P35441 Gm11434-201ENSMUST00000122379 629 ntBASIC14.36□□□□□ -0.11
Thbs1P35441 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.36□□□□□ -0.11
Thbs1P35441 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Thbs1P35441 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thbs1P35441 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thbs1P35441 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thbs1P35441 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thbs1P35441 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thbs1P35441 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thbs1P35441 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Thbs1P35441 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Thbs1P35441 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thbs1P35441 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thbs1P35441 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thbs1P35441 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Thbs1P35441 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thbs1P35441 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thbs1P35441 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Thbs1P35441 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thbs1P35441 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Thbs1P35441 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thbs1P35441 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Thbs1P35441 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms