Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40P27512 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40P27512 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40P27512 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.07□□□□□ -0.16
Cd40P27512 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40P27512 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.07□□□□□ -0.16
Cd40P27512 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.07□□□□□ -0.16
Cd40P27512 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cd40P27512 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.07□□□□□ -0.16
Cd40P27512 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Cd40P27512 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40P27512 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40P27512 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cd40P27512 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40P27512 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Cd40P27512 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40P27512 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40P27512 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40P27512 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40P27512 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40P27512 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40P27512 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40P27512 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40P27512 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40P27512 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40P27512 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40P27512 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Cd40P27512 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.07□□□□□ -0.16
Cd40P27512 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.06□□□□□ -0.16
Cd40P27512 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.06□□□□□ -0.16
Cd40P27512 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.06□□□□□ -0.16
Cd40P27512 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Gm13884-201ENSMUST00000118103 829 ntBASIC14.06□□□□□ -0.16
Cd40P27512 Gm7862-201ENSMUST00000121461 292 ntBASIC14.06□□□□□ -0.16
Cd40P27512 Gm11452-201ENSMUST00000122376 690 ntBASIC14.06□□□□□ -0.16
Cd40P27512 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Gm7230-201ENSMUST00000173026 815 ntBASIC14.06□□□□□ -0.16
Cd40P27512 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Gm5864-201ENSMUST00000202263 970 ntBASIC14.06□□□□□ -0.16
Cd40P27512 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.06□□□□□ -0.16
Cd40P27512 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.06□□□□□ -0.16
Cd40P27512 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Cd40P27512 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cd40P27512 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.06□□□□□ -0.16
Cd40P27512 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cd40P27512 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40P27512 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.06□□□□□ -0.16
Cd40P27512 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.06□□□□□ -0.16
Cd40P27512 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.05□□□□□ -0.16
Cd40P27512 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.05□□□□□ -0.16
Cd40P27512 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cd40P27512 Gm7222-201ENSMUST00000117512 906 ntBASIC14.05□□□□□ -0.16
Cd40P27512 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.05□□□□□ -0.16
Cd40P27512 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.05□□□□□ -0.16
Cd40P27512 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.05□□□□□ -0.16
Cd40P27512 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cd40P27512 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cd40P27512 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.05□□□□□ -0.16
Cd40P27512 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms