Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.99□□□□□ -0.33
Col8a2P25318 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Col8a2P25318 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.98□□□□□ -0.33
Col8a2P25318 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col8a2P25318 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Col8a2P25318 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col8a2P25318 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col8a2P25318 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col8a2P25318 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col8a2P25318 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Col8a2P25318 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col8a2P25318 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col8a2P25318 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col8a2P25318 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col8a2P25318 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.98□□□□□ -0.33
Col8a2P25318 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
Col8a2P25318 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col8a2P25318 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Col8a2P25318 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.98□□□□□ -0.33
Col8a2P25318 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.98□□□□□ -0.33
Col8a2P25318 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.98□□□□□ -0.33
Col8a2P25318 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.98□□□□□ -0.33
Col8a2P25318 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.98□□□□□ -0.33
Col8a2P25318 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.98□□□□□ -0.33
Col8a2P25318 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.98□□□□□ -0.33
Col8a2P25318 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.98□□□□□ -0.33
Col8a2P25318 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.98□□□□□ -0.33
Col8a2P25318 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col8a2P25318 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col8a2P25318 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col8a2P25318 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.98□□□□□ -0.33
Col8a2P25318 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col8a2P25318 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col8a2P25318 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Col8a2P25318 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col8a2P25318 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col8a2P25318 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col8a2P25318 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.97□□□□□ -0.33
Col8a2P25318 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col8a2P25318 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col8a2P25318 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col8a2P25318 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.97□□□□□ -0.33
Col8a2P25318 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col8a2P25318 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.97□□□□□ -0.33
Col8a2P25318 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col8a2P25318 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col8a2P25318 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Col8a2P25318 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col8a2P25318 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col8a2P25318 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Col8a2P25318 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col8a2P25318 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Col8a2P25318 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col8a2P25318 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col8a2P25318 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col8a2P25318 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Col8a2P25318 Gm8344-201ENSMUST00000119813 856 ntBASIC12.97□□□□□ -0.33
Col8a2P25318 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.97□□□□□ -0.33
Col8a2P25318 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col8a2P25318 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col8a2P25318 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.97□□□□□ -0.33
Col8a2P25318 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col8a2P25318 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col8a2P25318 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col8a2P25318 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col8a2P25318 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.97□□□□□ -0.33
Col8a2P25318 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Col8a2P25318 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col8a2P25318 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col8a2P25318 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col8a2P25318 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col8a2P25318 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col8a2P25318 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.96□□□□□ -0.33
Col8a2P25318 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.96□□□□□ -0.33
Col8a2P25318 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
Col8a2P25318 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col8a2P25318 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col8a2P25318 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col8a2P25318 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col8a2P25318 Gm13597-201ENSMUST00000121239 375 ntBASIC12.96□□□□□ -0.33
Col8a2P25318 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col8a2P25318 Gm27300-201ENSMUST00000184085 97 ntBASIC12.96□□□□□ -0.33
Col8a2P25318 Gm27335-201ENSMUST00000184758 97 ntBASIC12.96□□□□□ -0.33
Col8a2P25318 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.96□□□□□ -0.33
Col8a2P25318 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.96□□□□□ -0.33
Col8a2P25318 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col8a2P25318 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col8a2P25318 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms