Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6bP23440 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.99■□□□□ 0.31
Pde6bP23440 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6bP23440 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6bP23440 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6bP23440 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6bP23440 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.99■□□□□ 0.31
Pde6bP23440 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.98■□□□□ 0.31
Pde6bP23440 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.98■□□□□ 0.31
Pde6bP23440 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.98■□□□□ 0.31
Pde6bP23440 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Pde6bP23440 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.98■□□□□ 0.31
Pde6bP23440 Gm37153-201ENSMUST00000193637 231 ntBASIC16.98■□□□□ 0.31
Pde6bP23440 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.98■□□□□ 0.31
Pde6bP23440 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.98■□□□□ 0.31
Pde6bP23440 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Pde6bP23440 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6bP23440 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Pde6bP23440 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6bP23440 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6bP23440 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6bP23440 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6bP23440 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pde6bP23440 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6bP23440 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.97■□□□□ 0.31
Pde6bP23440 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6bP23440 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6bP23440 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6bP23440 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6bP23440 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Pde6bP23440 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6bP23440 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6bP23440 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6bP23440 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6bP23440 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6bP23440 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pde6bP23440 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pde6bP23440 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6bP23440 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
Pde6bP23440 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6bP23440 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6bP23440 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6bP23440 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Pde6bP23440 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Pde6bP23440 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.96■□□□□ 0.31
Pde6bP23440 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6bP23440 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6bP23440 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6bP23440 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6bP23440 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6bP23440 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.96■□□□□ 0.31
Pde6bP23440 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6bP23440 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.96■□□□□ 0.31
Pde6bP23440 Gm45167-201ENSMUST00000208007 322 ntBASIC16.96■□□□□ 0.31
Pde6bP23440 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6bP23440 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6bP23440 Gm10175-201ENSMUST00000086013 645 ntBASIC16.96■□□□□ 0.31
Pde6bP23440 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6bP23440 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6bP23440 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6bP23440 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
Pde6bP23440 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pde6bP23440 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pde6bP23440 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Pde6bP23440 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.96■□□□□ 0.3
Pde6bP23440 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6bP23440 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6bP23440 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6bP23440 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Pde6bP23440 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6bP23440 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6bP23440 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6bP23440 Gm25911-201ENSMUST00000157621 56 ntBASIC16.95■□□□□ 0.3
Pde6bP23440 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6bP23440 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.95■□□□□ 0.3
Pde6bP23440 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.95■□□□□ 0.3
Pde6bP23440 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms