Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cdx1P18111 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.61□□□□□ -0.39
Cdx1P18111 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.61□□□□□ -0.39
Cdx1P18111 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cdx1P18111 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdx1P18111 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Cdx1P18111 Gm16061-201ENSMUST00000122167 857 ntBASIC12.61□□□□□ -0.39
Cdx1P18111 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.61□□□□□ -0.39
Cdx1P18111 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdx1P18111 Gm22697-201ENSMUST00000175194 63 ntBASIC12.61□□□□□ -0.39
Cdx1P18111 Gm6345-202ENSMUST00000180900 204 ntBASIC12.61□□□□□ -0.39
Cdx1P18111 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Gm33142-201ENSMUST00000193913 867 ntBASIC12.61□□□□□ -0.39
Cdx1P18111 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Cdx1P18111 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdx1P18111 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx1P18111 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx1P18111 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cdx1P18111 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx1P18111 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx1P18111 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx1P18111 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cdx1P18111 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx1P18111 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx1P18111 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.6□□□□□ -0.39
Cdx1P18111 BC037039-201ENSMUST00000192003 2205 ntBASIC12.6□□□□□ -0.39
Cdx1P18111 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cdx1P18111 Gm13474-201ENSMUST00000122466 815 ntBASIC12.6□□□□□ -0.39
Cdx1P18111 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdx1P18111 Gm25016-201ENSMUST00000158399 131 ntBASIC12.6□□□□□ -0.39
Cdx1P18111 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdx1P18111 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdx1P18111 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx1P18111 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx1P18111 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx1P18111 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx1P18111 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cdx1P18111 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdx1P18111 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx1P18111 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx1P18111 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx1P18111 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdx1P18111 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx1P18111 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx1P18111 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx1P18111 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx1P18111 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx1P18111 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx1P18111 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx1P18111 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cdx1P18111 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdx1P18111 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.59□□□□□ -0.39
Cdx1P18111 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Cdx1P18111 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdx1P18111 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.59□□□□□ -0.39
Cdx1P18111 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cdx1P18111 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.59□□□□□ -0.39
Cdx1P18111 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdx1P18111 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx1P18111 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms