Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.09■□□□□ 0.81
Hoxc9P09633 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Hoxc9P09633 Gm45293-201ENSMUST00000209754 1812 ntBASIC20.09■□□□□ 0.81
Hoxc9P09633 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc9P09633 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc9P09633 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc9P09633 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Hoxc9P09633 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc9P09633 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc9P09633 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc9P09633 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.08■□□□□ 0.81
Hoxc9P09633 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc9P09633 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc9P09633 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc9P09633 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc9P09633 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc9P09633 Gm25287-201ENSMUST00000103846 110 ntBASIC20.08■□□□□ 0.81
Hoxc9P09633 Gm22918-201ENSMUST00000103855 110 ntBASIC20.08■□□□□ 0.81
Hoxc9P09633 Gm6973-201ENSMUST00000117080 721 ntBASIC20.08■□□□□ 0.81
Hoxc9P09633 Gm10253-201ENSMUST00000194270 940 ntBASIC20.08■□□□□ 0.81
Hoxc9P09633 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc9P09633 AC166341.4-201ENSMUST00000220625 123 ntBASIC20.08■□□□□ 0.81
Hoxc9P09633 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc9P09633 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Hoxc9P09633 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Hoxc9P09633 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hoxc9P09633 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Hoxc9P09633 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Hoxc9P09633 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Hoxc9P09633 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc9P09633 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc9P09633 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc9P09633 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc9P09633 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc9P09633 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc9P09633 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc9P09633 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc9P09633 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc9P09633 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc9P09633 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc9P09633 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc9P09633 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc9P09633 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc9P09633 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC20.07■□□□□ 0.8
Hoxc9P09633 AC131710.1-201ENSMUST00000228336 990 ntBASIC20.07■□□□□ 0.8
Hoxc9P09633 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Hoxc9P09633 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc9P09633 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc9P09633 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc9P09633 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc9P09633 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Hoxc9P09633 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC20.07■□□□□ 0.8
Hoxc9P09633 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc9P09633 AC154767.3-201ENSMUST00000225150 1342 ntBASIC20.06■□□□□ 0.8
Hoxc9P09633 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc9P09633 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc9P09633 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Hoxc9P09633 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc9P09633 Gm7336-201ENSMUST00000107041 1232 ntBASIC20.06■□□□□ 0.8
Hoxc9P09633 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc9P09633 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc9P09633 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC20.06■□□□□ 0.8
Hoxc9P09633 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Hoxc9P09633 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc9P09633 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC20.06■□□□□ 0.8
Hoxc9P09633 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC20.06■□□□□ 0.8
Hoxc9P09633 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc9P09633 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc9P09633 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc9P09633 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.06■□□□□ 0.8
Hoxc9P09633 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.06■□□□□ 0.8
Hoxc9P09633 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxc9P09633 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Hoxc9P09633 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxc9P09633 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxc9P09633 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxc9P09633 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxc9P09633 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxc9P09633 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC20.05■□□□□ 0.8
Hoxc9P09633 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC20.05■□□□□ 0.8
Hoxc9P09633 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC20.05■□□□□ 0.8
Hoxc9P09633 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxc9P09633 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxc9P09633 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Hoxc9P09633 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC20.05■□□□□ 0.8
Hoxc9P09633 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Hoxc9P09633 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Hoxc9P09633 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Hoxc9P09633 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc9P09633 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc9P09633 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Hoxc9P09633 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc9P09633 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc9P09633 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC20.04■□□□□ 0.8
Hoxc9P09633 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Hoxc9P09633 Gm24158-201ENSMUST00000175263 71 ntBASIC20.04■□□□□ 0.8
Hoxc9P09633 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Hoxc9P09633 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc9P09633 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc9P09633 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms