Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CfdP03953 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.02□□□□□ -0.33
CfdP03953 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CfdP03953 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CfdP03953 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CfdP03953 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.02□□□□□ -0.33
CfdP03953 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CfdP03953 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.02□□□□□ -0.33
CfdP03953 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CfdP03953 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.02□□□□□ -0.33
CfdP03953 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CfdP03953 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.02□□□□□ -0.33
CfdP03953 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CfdP03953 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CfdP03953 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
CfdP03953 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CfdP03953 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CfdP03953 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CfdP03953 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CfdP03953 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.02□□□□□ -0.33
CfdP03953 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CfdP03953 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CfdP03953 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CfdP03953 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CfdP03953 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CfdP03953 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CfdP03953 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CfdP03953 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CfdP03953 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CfdP03953 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CfdP03953 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CfdP03953 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.01□□□□□ -0.33
CfdP03953 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CfdP03953 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CfdP03953 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CfdP03953 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CfdP03953 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CfdP03953 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CfdP03953 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CfdP03953 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.01□□□□□ -0.33
CfdP03953 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.01□□□□□ -0.33
CfdP03953 Gm6257-201ENSMUST00000163864 910 ntBASIC13.01□□□□□ -0.33
CfdP03953 Gm21814-202ENSMUST00000203277 873 ntBASIC13.01□□□□□ -0.33
CfdP03953 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CfdP03953 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CfdP03953 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CfdP03953 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CfdP03953 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.01□□□□□ -0.33
CfdP03953 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CfdP03953 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.01□□□□□ -0.33
CfdP03953 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CfdP03953 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.01□□□□□ -0.33
CfdP03953 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CfdP03953 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CfdP03953 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.01□□□□□ -0.33
CfdP03953 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CfdP03953 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CfdP03953 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CfdP03953 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CfdP03953 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CfdP03953 Arhgef4-208ENSMUST00000211073 171 ntBASIC13□□□□□ -0.33
CfdP03953 AC153881.1-201ENSMUST00000214448 284 ntBASIC13□□□□□ -0.33
CfdP03953 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13□□□□□ -0.33
CfdP03953 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CfdP03953 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Gm43509-201ENSMUST00000196551 2594 ntBASIC13□□□□□ -0.33
CfdP03953 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13□□□□□ -0.33
CfdP03953 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CfdP03953 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CfdP03953 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CfdP03953 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CfdP03953 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CfdP03953 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CfdP03953 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CfdP03953 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CfdP03953 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CfdP03953 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CfdP03953 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CfdP03953 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms