Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.39□□□□□ -0.59
TcraP01849 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.39□□□□□ -0.59
TcraP01849 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
TcraP01849 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.39□□□□□ -0.59
TcraP01849 Gm10653-202ENSMUST00000139570 835 ntBASIC11.39□□□□□ -0.59
TcraP01849 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
TcraP01849 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
TcraP01849 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.39□□□□□ -0.59
TcraP01849 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.39□□□□□ -0.59
TcraP01849 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.39□□□□□ -0.59
TcraP01849 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
TcraP01849 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TcraP01849 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
TcraP01849 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.38□□□□□ -0.59
TcraP01849 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.38□□□□□ -0.59
TcraP01849 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
TcraP01849 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
TcraP01849 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC11.38□□□□□ -0.59
TcraP01849 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC11.38□□□□□ -0.59
TcraP01849 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
TcraP01849 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
TcraP01849 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
TcraP01849 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.38□□□□□ -0.59
TcraP01849 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TcraP01849 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TcraP01849 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
TcraP01849 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TcraP01849 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TcraP01849 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
TcraP01849 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.37□□□□□ -0.59
TcraP01849 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TcraP01849 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TcraP01849 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
TcraP01849 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TcraP01849 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TcraP01849 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TcraP01849 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.37□□□□□ -0.59
TcraP01849 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TcraP01849 Gm18958-201ENSMUST00000174258 762 ntBASIC11.37□□□□□ -0.59
TcraP01849 Gm10698-201ENSMUST00000182663 604 ntBASIC11.37□□□□□ -0.59
TcraP01849 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC11.37□□□□□ -0.59
TcraP01849 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TcraP01849 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TcraP01849 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TcraP01849 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TcraP01849 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TcraP01849 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TcraP01849 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms