Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd4O89016 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd4O89016 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd4O89016 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.09□□□□□ -0.15
Abcd4O89016 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd4O89016 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.09□□□□□ -0.15
Abcd4O89016 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd4O89016 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd4O89016 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd4O89016 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd4O89016 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd4O89016 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd4O89016 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd4O89016 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd4O89016 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd4O89016 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd4O89016 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd4O89016 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd4O89016 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Abcd4O89016 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Abcd4O89016 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Abcd4O89016 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.08□□□□□ -0.15
Abcd4O89016 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Abcd4O89016 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Abcd4O89016 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Abcd4O89016 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.08□□□□□ -0.15
Abcd4O89016 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.08□□□□□ -0.15
Abcd4O89016 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Abcd4O89016 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd4O89016 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd4O89016 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd4O89016 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd4O89016 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.08□□□□□ -0.16
Abcd4O89016 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd4O89016 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Abcd4O89016 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.08□□□□□ -0.16
Abcd4O89016 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.08□□□□□ -0.16
Abcd4O89016 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd4O89016 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd4O89016 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd4O89016 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd4O89016 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd4O89016 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd4O89016 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd4O89016 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd4O89016 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd4O89016 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd4O89016 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd4O89016 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd4O89016 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd4O89016 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Abcd4O89016 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd4O89016 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd4O89016 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd4O89016 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Abcd4O89016 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd4O89016 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Abcd4O89016 Gm7222-201ENSMUST00000117512 906 ntBASIC14.07□□□□□ -0.16
Abcd4O89016 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.07□□□□□ -0.16
Abcd4O89016 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Abcd4O89016 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd4O89016 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd4O89016 Mir6404-201ENSMUST00000183699 94 ntBASIC14.07□□□□□ -0.16
Abcd4O89016 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.07□□□□□ -0.16
Abcd4O89016 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.07□□□□□ -0.16
Abcd4O89016 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.07□□□□□ -0.16
Abcd4O89016 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
Abcd4O89016 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.07□□□□□ -0.16
Abcd4O89016 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd4O89016 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd4O89016 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd4O89016 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd4O89016 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd4O89016 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd4O89016 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Abcd4O89016 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Abcd4O89016 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd4O89016 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd4O89016 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd4O89016 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd4O89016 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Abcd4O89016 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd4O89016 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.07□□□□□ -0.16
Abcd4O89016 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Abcd4O89016 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd4O89016 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd4O89016 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Abcd4O89016 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Abcd4O89016 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd4O89016 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd4O89016 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd4O89016 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd4O89016 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd4O89016 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Abcd4O89016 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd4O89016 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.06□□□□□ -0.16
Abcd4O89016 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.06□□□□□ -0.16
Abcd4O89016 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd4O89016 Gm6550-201ENSMUST00000187574 993 ntBASIC14.06□□□□□ -0.16
Abcd4O89016 Gm8000-201ENSMUST00000188378 592 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms