Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.98■□□□□ 0.15
Syn1O88935 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Syn1O88935 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.98■□□□□ 0.15
Syn1O88935 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.98■□□□□ 0.15
Syn1O88935 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Syn1O88935 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.98■□□□□ 0.15
Syn1O88935 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.98■□□□□ 0.15
Syn1O88935 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syn1O88935 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syn1O88935 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Syn1O88935 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syn1O88935 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Syn1O88935 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syn1O88935 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syn1O88935 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Syn1O88935 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Syn1O88935 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.97■□□□□ 0.15
Syn1O88935 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syn1O88935 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syn1O88935 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syn1O88935 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syn1O88935 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Syn1O88935 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syn1O88935 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syn1O88935 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
Syn1O88935 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syn1O88935 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.97■□□□□ 0.15
Syn1O88935 Gm7730-201ENSMUST00000212486 454 ntBASIC15.97■□□□□ 0.15
Syn1O88935 Gm25857-201ENSMUST00000082788 129 ntBASIC15.97■□□□□ 0.15
Syn1O88935 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syn1O88935 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
Syn1O88935 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syn1O88935 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.97■□□□□ 0.15
Syn1O88935 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Syn1O88935 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Syn1O88935 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Syn1O88935 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Syn1O88935 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.96■□□□□ 0.15
Syn1O88935 Gm25287-201ENSMUST00000103846 110 ntBASIC15.96■□□□□ 0.15
Syn1O88935 Gm22918-201ENSMUST00000103855 110 ntBASIC15.96■□□□□ 0.15
Syn1O88935 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Syn1O88935 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Syn1O88935 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Syn1O88935 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.96■□□□□ 0.15
Syn1O88935 Gm18246-201ENSMUST00000221023 728 ntBASIC15.96■□□□□ 0.15
Syn1O88935 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.96■□□□□ 0.15
Syn1O88935 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.96■□□□□ 0.15
Syn1O88935 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Syn1O88935 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Syn1O88935 Syt7-205ENSMUST00000224135 1557 ntBASIC15.96■□□□□ 0.14
Syn1O88935 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Syn1O88935 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Syn1O88935 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.95■□□□□ 0.14
Syn1O88935 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.95■□□□□ 0.14
Syn1O88935 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syn1O88935 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.95■□□□□ 0.14
Syn1O88935 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.95■□□□□ 0.14
Syn1O88935 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syn1O88935 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syn1O88935 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syn1O88935 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syn1O88935 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Syn1O88935 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Syn1O88935 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syn1O88935 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Syn1O88935 Gm7488-201ENSMUST00000117148 684 ntBASIC15.95■□□□□ 0.14
Syn1O88935 Gm12490-201ENSMUST00000120255 560 ntBASIC15.95■□□□□ 0.14
Syn1O88935 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.95■□□□□ 0.14
Syn1O88935 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syn1O88935 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Syn1O88935 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Syn1O88935 Mir7684-201ENSMUST00000183858 60 ntBASIC15.95■□□□□ 0.14
Syn1O88935 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Syn1O88935 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.95■□□□□ 0.14
Syn1O88935 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syn1O88935 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syn1O88935 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Syn1O88935 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syn1O88935 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Syn1O88935 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syn1O88935 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syn1O88935 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syn1O88935 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syn1O88935 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Syn1O88935 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.94■□□□□ 0.14
Syn1O88935 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Syn1O88935 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Syn1O88935 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Syn1O88935 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Syn1O88935 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Syn1O88935 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Syn1O88935 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Syn1O88935 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Syn1O88935 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Syn1O88935 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Syn1O88935 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Syn1O88935 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Syn1O88935 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Syn1O88935 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Syn1O88935 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms