Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IkbkbO88351 Gm18195-201ENSMUST00000207604 706 ntBASIC17.2■□□□□ 0.34
IkbkbO88351 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IkbkbO88351 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IkbkbO88351 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IkbkbO88351 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IkbkbO88351 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
IkbkbO88351 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IkbkbO88351 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IkbkbO88351 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IkbkbO88351 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IkbkbO88351 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IkbkbO88351 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IkbkbO88351 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IkbkbO88351 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IkbkbO88351 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IkbkbO88351 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IkbkbO88351 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IkbkbO88351 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IkbkbO88351 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IkbkbO88351 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IkbkbO88351 Gm4459-201ENSMUST00000118750 468 ntBASIC17.19■□□□□ 0.34
IkbkbO88351 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
IkbkbO88351 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IkbkbO88351 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IkbkbO88351 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.19■□□□□ 0.34
IkbkbO88351 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IkbkbO88351 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IkbkbO88351 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IkbkbO88351 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IkbkbO88351 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IkbkbO88351 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IkbkbO88351 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IkbkbO88351 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
IkbkbO88351 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IkbkbO88351 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IkbkbO88351 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IkbkbO88351 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
IkbkbO88351 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.18■□□□□ 0.34
IkbkbO88351 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IkbkbO88351 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IkbkbO88351 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IkbkbO88351 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IkbkbO88351 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IkbkbO88351 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.18■□□□□ 0.34
IkbkbO88351 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.18■□□□□ 0.34
IkbkbO88351 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.18■□□□□ 0.34
IkbkbO88351 Gm9172-201ENSMUST00000212092 954 ntBASIC17.18■□□□□ 0.34
IkbkbO88351 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IkbkbO88351 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IkbkbO88351 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IkbkbO88351 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IkbkbO88351 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
IkbkbO88351 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
IkbkbO88351 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
IkbkbO88351 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.17■□□□□ 0.34
IkbkbO88351 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
IkbkbO88351 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
IkbkbO88351 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
IkbkbO88351 Gm12497-201ENSMUST00000138778 237 ntBASIC17.17■□□□□ 0.34
IkbkbO88351 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
IkbkbO88351 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
IkbkbO88351 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
IkbkbO88351 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
IkbkbO88351 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
IkbkbO88351 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.17■□□□□ 0.34
IkbkbO88351 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IkbkbO88351 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IkbkbO88351 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
IkbkbO88351 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.16■□□□□ 0.34
IkbkbO88351 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
IkbkbO88351 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.16■□□□□ 0.34
IkbkbO88351 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
IkbkbO88351 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.16■□□□□ 0.34
IkbkbO88351 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.16■□□□□ 0.34
IkbkbO88351 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
IkbkbO88351 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms