Protein–RNA interactions for Protein: O70576

Stag3, Cohesin subunit SA-3, mousemouse

Predictions only

Length 1,240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag3O70576 Gm20553-201ENSMUST00000204205 844 ntBASIC21.32■■□□□ 1
Stag3O70576 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC21.32■■□□□ 1
Stag3O70576 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC21.32■■□□□ 1
Stag3O70576 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Stag3O70576 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC21.32■■□□□ 1
Stag3O70576 Gm13332-201ENSMUST00000120451 1398 ntBASIC21.32■■□□□ 1
Stag3O70576 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Stag3O70576 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC21.31■■□□□ 1
Stag3O70576 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Stag3O70576 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Stag3O70576 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Stag3O70576 Gm12008-201ENSMUST00000117791 755 ntBASIC21.31■■□□□ 1
Stag3O70576 Gm14722-201ENSMUST00000118943 689 ntBASIC21.31■■□□□ 1
Stag3O70576 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Stag3O70576 Gm10499-201ENSMUST00000174094 934 ntBASIC21.31■■□□□ 1
Stag3O70576 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC21.31■■□□□ 1
Stag3O70576 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC21.31■■□□□ 1
Stag3O70576 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Stag3O70576 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC21.31■■□□□ 1
Stag3O70576 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Stag3O70576 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Stag3O70576 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Stag3O70576 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Stag3O70576 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Stag3O70576 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Stag3O70576 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Stag3O70576 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Stag3O70576 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC21.3■■□□□ 1
Stag3O70576 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC21.3■■□□□ 1
Stag3O70576 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Stag3O70576 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC21.3■■□□□ 1
Stag3O70576 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Stag3O70576 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC21.3■■□□□ 1
Stag3O70576 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC21.3■■□□□ 1
Stag3O70576 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC21.3■■□□□ 1
Stag3O70576 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Stag3O70576 Gm44335-201ENSMUST00000196879 141 ntBASIC21.3■■□□□ 1
Stag3O70576 Gm44297-201ENSMUST00000198304 141 ntBASIC21.3■■□□□ 1
Stag3O70576 Gm44346-201ENSMUST00000198851 141 ntBASIC21.3■■□□□ 1
Stag3O70576 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC21.3■■□□□ 1
Stag3O70576 AC153937.1-201ENSMUST00000218734 412 ntBASIC21.3■■□□□ 1
Stag3O70576 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Stag3O70576 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Stag3O70576 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC21.3■■□□□ 1
Stag3O70576 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC21.3■■□□□ 1
Stag3O70576 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC21.3■■□□□ 1
Stag3O70576 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Stag3O70576 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC21.3■■□□□ 1
Stag3O70576 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC21.3■■□□□ 1
Stag3O70576 Gm19439-201ENSMUST00000198195 2273 ntBASIC21.3■■□□□ 1
Stag3O70576 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC21.3■■□□□ 1
Stag3O70576 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Stag3O70576 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC21.29■■□□□ 1
Stag3O70576 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC21.29■■□□□ 1
Stag3O70576 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC21.29■■□□□ 1
Stag3O70576 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Stag3O70576 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Stag3O70576 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Stag3O70576 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Stag3O70576 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC21.29■■□□□ 1
Stag3O70576 Gm9385-201ENSMUST00000117563 472 ntBASIC21.29■■□□□ 1
Stag3O70576 Gm11745-201ENSMUST00000121669 448 ntBASIC21.29■■□□□ 1
Stag3O70576 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC21.29■■□□□ 1
Stag3O70576 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC21.29■■□□□ 1
Stag3O70576 AC139382.1-201ENSMUST00000221402 498 ntBASIC21.29■■□□□ 1
Stag3O70576 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Stag3O70576 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC21.29■■□□□ 1
Stag3O70576 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Stag3O70576 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Stag3O70576 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC21.29■■□□□ 1
Stag3O70576 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Stag3O70576 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Stag3O70576 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Stag3O70576 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Stag3O70576 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Stag3O70576 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Stag3O70576 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Stag3O70576 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC21.28■■□□□ 1
Stag3O70576 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC21.28■■□□□ 1
Stag3O70576 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Stag3O70576 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC21.28■■□□□ 1
Stag3O70576 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Stag3O70576 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Stag3O70576 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC21.28■■□□□ 1
Stag3O70576 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Stag3O70576 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Stag3O70576 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Stag3O70576 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Stag3O70576 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC21.28■■□□□ 1
Stag3O70576 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Stag3O70576 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC21.27■■□□□ 1
Stag3O70576 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Stag3O70576 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC21.27■■□□□ 1
Stag3O70576 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Stag3O70576 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Stag3O70576 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC21.27■■□□□ 1
Stag3O70576 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC21.27■■□□□ 1
Stag3O70576 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Stag3O70576 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Stag3O70576 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms