Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim3O70209 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.12□□□□□ -0.15
Pdlim3O70209 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.12□□□□□ -0.15
Pdlim3O70209 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim3O70209 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim3O70209 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.12□□□□□ -0.15
Pdlim3O70209 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.12□□□□□ -0.15
Pdlim3O70209 Gm21559-201ENSMUST00000220638 855 ntBASIC14.12□□□□□ -0.15
Pdlim3O70209 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim3O70209 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim3O70209 Gm8587-201ENSMUST00000076538 843 ntBASIC14.12□□□□□ -0.15
Pdlim3O70209 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pdlim3O70209 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim3O70209 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.12□□□□□ -0.15
Pdlim3O70209 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim3O70209 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim3O70209 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim3O70209 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim3O70209 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim3O70209 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim3O70209 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim3O70209 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Pdlim3O70209 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim3O70209 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.12□□□□□ -0.15
Pdlim3O70209 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim3O70209 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.11□□□□□ -0.15
Pdlim3O70209 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.11□□□□□ -0.15
Pdlim3O70209 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pdlim3O70209 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Pdlim3O70209 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Pdlim3O70209 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pdlim3O70209 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 Gm11355-201ENSMUST00000121120 306 ntBASIC14.11□□□□□ -0.15
Pdlim3O70209 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.11□□□□□ -0.15
Pdlim3O70209 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Pdlim3O70209 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Pdlim3O70209 Gm7889-201ENSMUST00000185591 958 ntBASIC14.11□□□□□ -0.15
Pdlim3O70209 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Pdlim3O70209 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.11□□□□□ -0.15
Pdlim3O70209 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Pdlim3O70209 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pdlim3O70209 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.11□□□□□ -0.15
Pdlim3O70209 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.11□□□□□ -0.15
Pdlim3O70209 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Pdlim3O70209 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pdlim3O70209 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim3O70209 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.11□□□□□ -0.15
Pdlim3O70209 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim3O70209 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim3O70209 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim3O70209 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim3O70209 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim3O70209 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim3O70209 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim3O70209 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pdlim3O70209 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim3O70209 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pdlim3O70209 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.1□□□□□ -0.15
Pdlim3O70209 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.1□□□□□ -0.15
Pdlim3O70209 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pdlim3O70209 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.1□□□□□ -0.15
Pdlim3O70209 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim3O70209 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim3O70209 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pdlim3O70209 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim3O70209 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim3O70209 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pdlim3O70209 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim3O70209 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim3O70209 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim3O70209 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim3O70209 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim3O70209 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Pdlim3O70209 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim3O70209 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim3O70209 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim3O70209 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim3O70209 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim3O70209 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.09□□□□□ -0.15
Pdlim3O70209 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms