Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx3O70137 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx3O70137 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx3O70137 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Alx3O70137 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Alx3O70137 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx3O70137 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx3O70137 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx3O70137 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Alx3O70137 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.19□□□□□ -0.14
Alx3O70137 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Alx3O70137 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.19□□□□□ -0.14
Alx3O70137 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx3O70137 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.18□□□□□ -0.14
Alx3O70137 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Alx3O70137 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Alx3O70137 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.18□□□□□ -0.14
Alx3O70137 Gm6623-201ENSMUST00000173570 544 ntBASIC14.18□□□□□ -0.14
Alx3O70137 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Alx3O70137 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.18□□□□□ -0.14
Alx3O70137 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Alx3O70137 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Alx3O70137 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.18□□□□□ -0.14
Alx3O70137 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Alx3O70137 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Alx3O70137 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx3O70137 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx3O70137 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx3O70137 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx3O70137 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.17□□□□□ -0.14
Alx3O70137 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx3O70137 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.17□□□□□ -0.14
Alx3O70137 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Alx3O70137 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx3O70137 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx3O70137 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Alx3O70137 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx3O70137 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx3O70137 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Alx3O70137 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Alx3O70137 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Alx3O70137 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.17□□□□□ -0.14
Alx3O70137 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Alx3O70137 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx3O70137 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx3O70137 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx3O70137 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Alx3O70137 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx3O70137 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx3O70137 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Alx3O70137 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Alx3O70137 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx3O70137 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx3O70137 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Alx3O70137 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Alx3O70137 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms