Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Per1O35973 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Per1O35973 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Per1O35973 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Per1O35973 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Per1O35973 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Per1O35973 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Per1O35973 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Per1O35973 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Per1O35973 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Per1O35973 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Per1O35973 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Per1O35973 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Per1O35973 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.83■□□□□ 0.28
Per1O35973 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.83■□□□□ 0.28
Per1O35973 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.83■□□□□ 0.28
Per1O35973 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Per1O35973 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.83■□□□□ 0.28
Per1O35973 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Per1O35973 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Per1O35973 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Per1O35973 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Per1O35973 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Per1O35973 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Per1O35973 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Per1O35973 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per1O35973 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per1O35973 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per1O35973 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Per1O35973 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per1O35973 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.82■□□□□ 0.28
Per1O35973 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per1O35973 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per1O35973 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per1O35973 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.82■□□□□ 0.28
Per1O35973 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.82■□□□□ 0.28
Per1O35973 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per1O35973 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per1O35973 Gm10175-201ENSMUST00000086013 645 ntBASIC16.82■□□□□ 0.28
Per1O35973 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Per1O35973 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per1O35973 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per1O35973 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per1O35973 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per1O35973 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per1O35973 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.82■□□□□ 0.28
Per1O35973 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Per1O35973 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.81■□□□□ 0.28
Per1O35973 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Per1O35973 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.81■□□□□ 0.28
Per1O35973 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Per1O35973 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.81■□□□□ 0.28
Per1O35973 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Per1O35973 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Per1O35973 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Per1O35973 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.81■□□□□ 0.28
Per1O35973 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.81■□□□□ 0.28
Per1O35973 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Per1O35973 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Per1O35973 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Per1O35973 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Per1O35973 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Per1O35973 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Per1O35973 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Per1O35973 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Per1O35973 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per1O35973 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per1O35973 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per1O35973 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Per1O35973 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Per1O35973 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per1O35973 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per1O35973 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Per1O35973 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per1O35973 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per1O35973 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per1O35973 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per1O35973 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per1O35973 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.8■□□□□ 0.28
Per1O35973 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.8■□□□□ 0.28
Per1O35973 Gm17968-201ENSMUST00000194902 784 ntBASIC16.8■□□□□ 0.28
Per1O35973 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Per1O35973 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.8■□□□□ 0.28
Per1O35973 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Per1O35973 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per1O35973 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per1O35973 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Per1O35973 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.8■□□□□ 0.28
Per1O35973 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per1O35973 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Per1O35973 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per1O35973 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.79■□□□□ 0.28
Per1O35973 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.79■□□□□ 0.28
Per1O35973 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per1O35973 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Per1O35973 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per1O35973 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Per1O35973 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Per1O35973 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.79■□□□□ 0.28
Per1O35973 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms