Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-3J3QMG8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-3J3QMG8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-3J3QMG8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Trav13d-3J3QMG8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-3J3QMG8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-3J3QMG8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-3J3QMG8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trav13d-3J3QMG8 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-3J3QMG8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-3J3QMG8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-3J3QMG8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-3J3QMG8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-3J3QMG8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Gm8344-201ENSMUST00000119813 856 ntBASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Gm34391-201ENSMUST00000203706 907 ntBASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-3J3QMG8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Birc2-201ENSMUST00000054878 378 ntBASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-3J3QMG8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms