Protein–RNA interactions for Protein: H3BKF4

Gm20708, Predicted gene 20708, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20708H3BKF4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.03□□□□□ -0.32
Gm20708H3BKF4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gm20708H3BKF4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gm20708H3BKF4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Gm20708H3BKF4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gm20708H3BKF4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gm20708H3BKF4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Gm20708H3BKF4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.02□□□□□ -0.32
Gm20708H3BKF4 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.02□□□□□ -0.32
Gm20708H3BKF4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gm20708H3BKF4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.02□□□□□ -0.32
Gm20708H3BKF4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Gm20708H3BKF4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.02□□□□□ -0.33
Gm20708H3BKF4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.02□□□□□ -0.33
Gm20708H3BKF4 Gm27741-201ENSMUST00000185060 237 ntBASIC13.02□□□□□ -0.33
Gm20708H3BKF4 Gm28659-201ENSMUST00000188013 759 ntBASIC13.02□□□□□ -0.33
Gm20708H3BKF4 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.02□□□□□ -0.33
Gm20708H3BKF4 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm20708H3BKF4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm20708H3BKF4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm20708H3BKF4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm20708H3BKF4 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.02□□□□□ -0.33
Gm20708H3BKF4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Gm20708H3BKF4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm20708H3BKF4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gm20708H3BKF4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm20708H3BKF4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.02□□□□□ -0.33
Gm20708H3BKF4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm20708H3BKF4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Gm15173-201ENSMUST00000122049 433 ntBASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Gm7230-201ENSMUST00000173026 815 ntBASIC13.01□□□□□ -0.33
Gm20708H3BKF4 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm20708H3BKF4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Gm20708H3BKF4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm20708H3BKF4 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gm20708H3BKF4 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm20708H3BKF4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm20708H3BKF4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms