Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh9F8VPK8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh9F8VPK8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh9F8VPK8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh9F8VPK8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh9F8VPK8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh9F8VPK8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Pcdh9F8VPK8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh9F8VPK8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh9F8VPK8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh9F8VPK8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.96■□□□□ 0.15
Pcdh9F8VPK8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Pcdh9F8VPK8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh9F8VPK8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.96■□□□□ 0.15
Pcdh9F8VPK8 Gm27704-201ENSMUST00000185094 107 ntBASIC15.96■□□□□ 0.15
Pcdh9F8VPK8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.96■□□□□ 0.15
Pcdh9F8VPK8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Pcdh9F8VPK8 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.96■□□□□ 0.15
Pcdh9F8VPK8 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.96■□□□□ 0.14
Pcdh9F8VPK8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Pcdh9F8VPK8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdh9F8VPK8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdh9F8VPK8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.96■□□□□ 0.14
Pcdh9F8VPK8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 Sybu-209ENSMUST00000228639 4113 ntBASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh9F8VPK8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Gm7284-201ENSMUST00000131667 944 ntBASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Rprl3-201ENSMUST00000157400 290 ntBASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh9F8VPK8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms