Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccnb1ip1D3Z3K2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccnb1ip1D3Z3K2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccnb1ip1D3Z3K2 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.13□□□□□ -0.15
Ccnb1ip1D3Z3K2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccnb1ip1D3Z3K2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccnb1ip1D3Z3K2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccnb1ip1D3Z3K2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Ccnb1ip1D3Z3K2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccnb1ip1D3Z3K2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccnb1ip1D3Z3K2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms