Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.55□□□□□ -0.4
Chd6A3KFM7 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Gm18056-201ENSMUST00000207670 568 ntBASIC12.55□□□□□ -0.4
Chd6A3KFM7 Gm18061-201ENSMUST00000208350 562 ntBASIC12.55□□□□□ -0.4
Chd6A3KFM7 Gm18063-201ENSMUST00000208529 568 ntBASIC12.55□□□□□ -0.4
Chd6A3KFM7 Gm18052-201ENSMUST00000208750 559 ntBASIC12.55□□□□□ -0.4
Chd6A3KFM7 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
Chd6A3KFM7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd6A3KFM7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.54□□□□□ -0.4
Chd6A3KFM7 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd6A3KFM7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.54□□□□□ -0.4
Chd6A3KFM7 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd6A3KFM7 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd6A3KFM7 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd6A3KFM7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.54□□□□□ -0.4
Chd6A3KFM7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.53□□□□□ -0.4
Chd6A3KFM7 Gm7584-201ENSMUST00000175829 940 ntBASIC12.53□□□□□ -0.4
Chd6A3KFM7 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.53□□□□□ -0.4
Chd6A3KFM7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Gm27243-201ENSMUST00000183964 521 ntBASIC12.53□□□□□ -0.4
Chd6A3KFM7 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Gm24526-201ENSMUST00000082921 158 ntBASIC12.53□□□□□ -0.4
Chd6A3KFM7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Gm44344-201ENSMUST00000200287 129 ntBASIC12.53□□□□□ -0.4
Chd6A3KFM7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.53□□□□□ -0.4
Chd6A3KFM7 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.53□□□□□ -0.4
Chd6A3KFM7 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd6A3KFM7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Chd6A3KFM7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Gm4875-201ENSMUST00000118257 786 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms