Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Gm5587-201ENSMUST00000206270 674 ntBASIC13□□□□□ -0.33
Trav12-1A0N8R1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13□□□□□ -0.33
Trav12-1A0N8R1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13□□□□□ -0.33
Trav12-1A0N8R1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13□□□□□ -0.33
Trav12-1A0N8R1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13□□□□□ -0.33
Trav12-1A0N8R1 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12-1A0N8R1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.99□□□□□ -0.33
Trav12-1A0N8R1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-1A0N8R1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms