Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cfap99A0A140LIX9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cfap99A0A140LIX9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cfap99A0A140LIX9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.59■□□□□ 0.57
Cfap99A0A140LIX9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cfap99A0A140LIX9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.59■□□□□ 0.57
Cfap99A0A140LIX9 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cfap99A0A140LIX9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cfap99A0A140LIX9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cfap99A0A140LIX9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.59■□□□□ 0.57
Cfap99A0A140LIX9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cfap99A0A140LIX9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cfap99A0A140LIX9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cfap99A0A140LIX9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cfap99A0A140LIX9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cfap99A0A140LIX9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cfap99A0A140LIX9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cfap99A0A140LIX9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cfap99A0A140LIX9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cfap99A0A140LIX9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.58■□□□□ 0.57
Cfap99A0A140LIX9 Gm4995-201ENSMUST00000117247 432 ntBASIC18.58■□□□□ 0.56
Cfap99A0A140LIX9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cfap99A0A140LIX9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.58■□□□□ 0.56
Cfap99A0A140LIX9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.58■□□□□ 0.56
Cfap99A0A140LIX9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.58■□□□□ 0.56
Cfap99A0A140LIX9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cfap99A0A140LIX9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cfap99A0A140LIX9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cfap99A0A140LIX9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cfap99A0A140LIX9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cfap99A0A140LIX9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cfap99A0A140LIX9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.58■□□□□ 0.56
Cfap99A0A140LIX9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cfap99A0A140LIX9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cfap99A0A140LIX9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap99A0A140LIX9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap99A0A140LIX9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap99A0A140LIX9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap99A0A140LIX9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap99A0A140LIX9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cfap99A0A140LIX9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap99A0A140LIX9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Cfap99A0A140LIX9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap99A0A140LIX9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap99A0A140LIX9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap99A0A140LIX9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap99A0A140LIX9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.57■□□□□ 0.56
Cfap99A0A140LIX9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap99A0A140LIX9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.57■□□□□ 0.56
Cfap99A0A140LIX9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap99A0A140LIX9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms