Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm19430-201ENSMUST00000193847 2137 ntBASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm7506-201ENSMUST00000207758 815 ntBASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Prob1-201ENSMUST00000097619 3021 ntBASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm44357-201ENSMUST00000195897 142 ntBASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm19658-201ENSMUST00000196231 138 ntBASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm44367-201ENSMUST00000196836 138 ntBASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm44350-201ENSMUST00000197197 138 ntBASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm44390-201ENSMUST00000197533 144 ntBASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm44313-201ENSMUST00000198018 138 ntBASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm44486-201ENSMUST00000198508 138 ntBASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm44314-201ENSMUST00000199263 138 ntBASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm44394-201ENSMUST00000199558 138 ntBASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm44484-201ENSMUST00000199873 138 ntBASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm44466-201ENSMUST00000200264 138 ntBASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm44359-201ENSMUST00000200671 138 ntBASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms