Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gm10698-201ENSMUST00000182663 604 ntBASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gm20760-201ENSMUST00000179197 648 ntBASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Odf3b-204ENSMUST00000227834 930 ntBASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms