Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Gm44454-201ENSMUST00000198541 138 ntBASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm7977-201ENSMUST00000193787 748 ntBASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms