Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gm12085-201ENSMUST00000119263 940 ntBASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gm12933-201ENSMUST00000120203 872 ntBASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gm6257-201ENSMUST00000163864 910 ntBASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.15□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.15□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trbv13-3A0A0B4J1H2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv13-3A0A0B4J1H2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trbv13-3A0A0B4J1H2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms