Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav12d-3A0A075B6A4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav12d-3A0A075B6A4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav12d-3A0A075B6A4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav12d-3A0A075B6A4 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav12d-3A0A075B6A4 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.65□□□□□ -0.55
Trav12d-3A0A075B6A4 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav12d-3A0A075B6A4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Gm37292-201ENSMUST00000192062 758 ntBASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Il3ra-202ENSMUST00000223589 738 ntBASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav12d-3A0A075B6A4 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-3A0A075B6A4 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms