Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Gm6345-202ENSMUST00000180900 204 ntBASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Gm9013-201ENSMUST00000132939 882 ntBASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Gm10231-201ENSMUST00000181584 441 ntBASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Gm10175-202ENSMUST00000208752 441 ntBASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-1A0A075B699 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav9d-1A0A075B699 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms