Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.07□□□□□ -0.48
Trav16A0A075B653 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16A0A075B653 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav16A0A075B653 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16A0A075B653 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Gm29707-201ENSMUST00000196325 491 ntBASIC12.06□□□□□ -0.48
Trav16A0A075B653 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav16A0A075B653 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.06□□□□□ -0.48
Trav16A0A075B653 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16A0A075B653 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.06□□□□□ -0.48
Trav16A0A075B653 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Gm3375-201ENSMUST00000203929 796 ntBASIC12.05□□□□□ -0.48
Trav16A0A075B653 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16A0A075B653 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.04□□□□□ -0.48
Trav16A0A075B653 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms