Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm18284-201ENSMUST00000172604 624 ntBASIC11.21□□□□□ -0.61
Trav8-1A0A075B641 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav8-1A0A075B641 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav8-1A0A075B641 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav8-1A0A075B641 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav8-1A0A075B641 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav8-1A0A075B641 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.21□□□□□ -0.62
Trav8-1A0A075B641 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Trav8-1A0A075B641 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav8-1A0A075B641 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Trav8-1A0A075B641 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Trav8-1A0A075B641 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.21□□□□□ -0.62
Trav8-1A0A075B641 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav8-1A0A075B641 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.21□□□□□ -0.62
Trav8-1A0A075B641 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav8-1A0A075B641 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav8-1A0A075B641 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav8-1A0A075B641 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Gm27000-201ENSMUST00000182943 842 ntBASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 AC122769.4-201ENSMUST00000228166 901 ntBASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav8-1A0A075B641 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Alkbh1-212ENSMUST00000185301 408 ntBASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav8-1A0A075B641 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms