Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Gm13474-201ENSMUST00000122466 815 ntBASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Gm7370-201ENSMUST00000219471 767 ntBASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16nA0A075B634 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Trav16nA0A075B634 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav16nA0A075B634 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.78□□□□□ -0.52
Trav16nA0A075B634 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16nA0A075B634 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16nA0A075B634 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Trav16nA0A075B634 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16nA0A075B634 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16nA0A075B634 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16nA0A075B634 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16nA0A075B634 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16nA0A075B634 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav16nA0A075B634 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16nA0A075B634 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Trav16nA0A075B634 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16nA0A075B634 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav16nA0A075B634 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Trav16nA0A075B634 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16nA0A075B634 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16nA0A075B634 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms