Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Gm38027-201ENSMUST00000192315 235 ntBASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Gm44450-201ENSMUST00000199528 114 ntBASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Gm18421-201ENSMUST00000204122 625 ntBASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7n-4A0A075B620 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Gm42569-201ENSMUST00000200539 472 ntBASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7n-4A0A075B620 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Gm8495-201ENSMUST00000188740 694 ntBASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Gm7791-201ENSMUST00000219066 539 ntBASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trav7n-4A0A075B620 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms