Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Gm6211-202ENSMUST00000167849 925 ntBASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Gm6365-201ENSMUST00000054711 744 ntBASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Efs-202ENSMUST00000227037 2540 ntBASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav4n-4A0A075B615 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Gm37297-201ENSMUST00000192974 2384 ntBASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Gm21956-201ENSMUST00000179946 522 ntBASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Gm27454-201ENSMUST00000185090 204 ntBASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Appbp2os-202ENSMUST00000206972 447 ntBASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav4n-4A0A075B615 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Gm43034-201ENSMUST00000198678 1364 ntBASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Gm43205-201ENSMUST00000198622 1968 ntBASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms