Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Gm7862-201ENSMUST00000121461 292 ntBASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Gm12497-201ENSMUST00000138778 237 ntBASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Prob1-201ENSMUST00000097619 3021 ntBASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Mir5131-201ENSMUST00000175426 93 ntBASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-1A0A075B606 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Gm19430-201ENSMUST00000193847 2137 ntBASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Gm4459-201ENSMUST00000118750 468 ntBASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Gm4535-201ENSMUST00000182274 558 ntBASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Gm10060-201ENSMUST00000212002 111 ntBASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Gm9172-201ENSMUST00000212092 954 ntBASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Gm10355-201ENSMUST00000097146 517 ntBASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms