Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-1A0A075B601 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-1A0A075B601 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-1A0A075B601 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-1A0A075B601 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-1A0A075B601 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9-1A0A075B601 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav9-1A0A075B601 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-1A0A075B601 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-1A0A075B601 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Gm6257-201ENSMUST00000163864 910 ntBASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Gm23634-201ENSMUST00000175071 91 ntBASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Mir7071-201ENSMUST00000184847 69 ntBASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Gm29518-201ENSMUST00000190858 372 ntBASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 BC037039-201ENSMUST00000192003 2205 ntBASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms