Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Clcn2Q9R0A1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Clcn2Q9R0A1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
Clcn2Q9R0A1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Clcn2Q9R0A1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Clcn2Q9R0A1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Clcn2Q9R0A1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Clcn2Q9R0A1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Gm10052-201ENSMUST00000168019 960 ntBASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Gm7729-201ENSMUST00000050143 801 ntBASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clcn2Q9R0A1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clcn2Q9R0A1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Clcn2Q9R0A1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Clcn2Q9R0A1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.94■□□□□ 0.14
Clcn2Q9R0A1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.94■□□□□ 0.14
Clcn2Q9R0A1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clcn2Q9R0A1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Clcn2Q9R0A1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.94■□□□□ 0.14
Clcn2Q9R0A1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clcn2Q9R0A1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clcn2Q9R0A1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Clcn2Q9R0A1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clcn2Q9R0A1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clcn2Q9R0A1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Clcn2Q9R0A1 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Clcn2Q9R0A1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clcn2Q9R0A1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clcn2Q9R0A1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clcn2Q9R0A1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Clcn2Q9R0A1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Clcn2Q9R0A1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clcn2Q9R0A1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Clcn2Q9R0A1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms